post:meanintinellipse.m

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post:meanintinellipse.m [2019/10/11 15:40] – pseudomoanerpost:meanintinellipse.m [2019/11/18 16:45] (current) – pseudomoaner
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 %Rescale ellipse parameters %Rescale ellipse parameters
-xPx = procTrack.x(ind)/pxSize; +xPx = round(procTrack.x(ind)/pxSize); 
-yPx = procTrack.y(ind)/pxSize; +yPx = round(procTrack.y(ind)/pxSize); 
-minLenPx = procTrack.minorLen(ind)/pxSize; +minLenPx = round(procTrack.minorLen(ind)/pxSize); 
-majLenPx = procTrack.majorLen(ind)/pxSize;+majLenPx = round(procTrack.majorLen(ind)/pxSize);
 phi = procTrack.phi(ind); phi = procTrack.phi(ind);
  
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   [meanFluo,totalFluo] = meanIntInEllipse(imPlane,procTracks(10),1,pixelSize);   [meanFluo,totalFluo] = meanIntInEllipse(imPlane,procTracks(10),1,pixelSize);
 </code> </code>
-  +  
 +**Example output:** Histogram of mean object intensities for a set of tracks with an associated fluorescence image at their first timepoint. For more details see [[post:labelstartandendfluocells.m]]. 
 + 
 +{{ :post:fluosplitexample2.png?nolink&400 |}}
  • post/meanintinellipse.m.1570804847.txt.gz
  • Last modified: 2019/10/11 15:40
  • by pseudomoaner