post:post-processing_toolbox

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post:post-processing_toolbox [2019/12/11 17:32] – [Data manipulation] pseudomoanerpost:post-processing_toolbox [2023/03/07 22:18] (current) – [Event labelling] pseudomoaner
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 Often, we are interested in the time at which an object performs a particular action. These scripts will help you to detect these 'events' and assign them to FAST's internal representation. Often, we are interested in the time at which an object performs a particular action. These scripts will help you to detect these 'events' and assign them to FAST's internal representation.
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 +  * [[post:labelThresholdEvents.m]]: Marks events when a specific track-associated variable drops above or below a specified threshold.
 +  * [[post:labelUnusualEvents.m]]: Marks events when a specific track-associated variable moves far awy from its average, taking into account the typical fluctuations in its value.
  
 ==== Data manipulation ==== ==== Data manipulation ====
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   * [[post:meanIntInEllipse.m]]: Creates an elliptical mask based on the specified object's geometry and measures the intensity of an image within that mask.   * [[post:meanIntInEllipse.m]]: Creates an elliptical mask based on the specified object's geometry and measures the intensity of an image within that mask.
-  * [[post:lienarlisePhi.m]]: Creates a new fieldfullPhi, in the procTracks structure that keeps track of the angle of a single pole.+  * [[post:filterTracks.m]]: Allows you to filter tracks with features (e.g. lengthfluorescence intensity) that exceed or fall below a user-specified value. 
 +  * [[post:extractTimePoints.m]]: Allows you to switch from track to slice-based representation of a specified data field. 
 +  * [[post:coarsegrainTrackData.m]]: Converts motility data from track-based view to coarsegrained flowfield view.
 ==== Lineage tree navigation and manipulation ==== ==== Lineage tree navigation and manipulation ====
  
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  • Last modified: 2019/12/11 17:32
  • by pseudomoaner