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start [2020/08/28 15:07] – pseudomoanerstart [2023/10/10 11:19] (current) – pseudomoaner
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   * No need for a Matlab license - FAST is also available as a free stand-alone application.    * No need for a Matlab license - FAST is also available as a free stand-alone application. 
  
-Sound good? Download the latest distribution of the Matlab files [[https://mackdurham.group.shef.ac.uk/FAST_v1_0_0.zip|here]], the stand-alone version [[setup:Installers|here]], or see the [[setup:installation|installation guide]] for more details on how to perform the download and setup process.+Sound good? Download the latest distribution of the Matlab files [[https://mackdurham.group.shef.ac.uk/FAST_DokuWiki/FASTdownloads/FAST_v2_1.zip|here]], the stand-alone version [[setup:Installers|here]], or see the [[setup:installation|installation guide]] for more details on how to perform the download and setup process.
  
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-{{ :textlogolarge.png?nolink&300 }} +{{ :textlogolarge.png?nolink&400 }}
- +
-[[https://zenodo.org/badge/latestdoi/237035985|{{ :logos:doibadge.png?300 }}]]+
  
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-<WRAP third column centeralign> +<WRAP quarter column centeralign> 
-[[https://mackdurham.group.shef.ac.uk/FAST_v1_0_0.zip|{{ :logos:downloadbutton.png?100}}]]+[[https://mackdurham.group.shef.ac.uk/FAST_DokuWiki/FASTdownloads/FAST_v2_1.zip|{{ :logos:downloadbutton.png?75 }}]] 
 +Download
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-[[https://github.com/Pseudomoaner/FAST|{{ :logos:githublogo.png?100 }}]]+[[https://github.com/Pseudomoaner/FAST|{{ :logos:githublogo.png?75 }}]] 
 +Code
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-[[https://twitter.com/Pseudomoaner1|{{:logos:twitterlogo.png?100 }}]]+[[https://figshare.com/projects/FAST_demonstration_data/155852|{{ :logos:figshare.png?75 }}]] 
 +Examples 
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 + 
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 +[[https://doi.org/10.1371/journal.pcbi.1011524|{{ :plos-one-vector-logo.png?75 }}]] 
 +Paper
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-===== What FAST can do ===== +===== Introduction to FAST =====
- +
-FIXME+
  
 +{{ youtube>9rDLSZ2AcQ0?large }}
 ===== The FAST modules ===== ===== The FAST modules =====
  
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 === Segmentation === === Segmentation ===
 [[usage:segmentation|{{ :logos:segmentation.png?nolink&200 }}]] [[usage:segmentation|{{ :logos:segmentation.png?nolink&200 }}]]
-The segmentation module allows you to automatically cut out objects from your images.+The segmentation module allows you to automatically isolate individual objects from your images.
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 === Tracking === === Tracking ===
 [[usage:tracking|{{ :logos:tracking.png?nolink&200 }}]] [[usage:tracking|{{ :logos:tracking.png?nolink&200 }}]]
-Tracking links individuals through time, allowing you to monitor objects as they evolve. A [[usage:track_correction|sub-GUI]] also allows manual correction of tracks. +Tracking links together objects between timepoints. A [[usage:track_correction|sub-GUI]] also allows manual correction of tracks. 
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 === Division detection === === Division detection ===
 [[usage:division_detection|{{ :logos:divisions.png?nolink&200 }}]] [[usage:division_detection|{{ :logos:divisions.png?nolink&200 }}]]
-Many biological samples consist of cells that repeatedly divide. This module allows you to detect these divisions and reconstruct lineages. +Many biological samples consist of cells that repeatedly divide. This module allows you to detect such divisions and reconstruct lineages. 
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