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--- usage:batch_processing [2020/01/22 13:21] – pseudomoaner
+++ usage:batch_processing [2020/06/26 11:48] (current) – [Installing Double FAST] pseudomoaner
@@ Line 11: / Line 11: @@
 The .m files required to run Double FAST are included in the main distribution of FAST, available from the [[setup:installation|download page]]. Please ensure that you download option 1, the Matlab-based version of FAST.
-Double FAST requires both these files and the main FAST files have been added to your Matlab path.
+To run, double FAST requires that both these files and the main FAST files have been added to your Matlab path.
 ===== Using Double FAST script =====
@@ Line 34: / Line 34: @@
 By default, this is set up assuming a root-branch structure as shown below:
-<diagram>
+{{ :usage:batchprocessfiles.png?nolink&200 |}}
-| RRR | | | | | | | | | |RRR{background-color:#ccffff}=Root
-| |!| | | | | | | | | |
-| |)|-|-| EE1 | | | | |EE1{background-color:#ccffcc}=Branch 1
-| |!| | | |!| | | | | |
-| |!| | | |`|-|-| IM1 |IM1{background-color:#ffcccc}=Dataset 1.czi
-| |!| | | | | | | | | |
-| |)|-|-| EE2 | | | | | |EE2{background-color:#ccffcc}=Branch 2
-| |!| | | | | | | | | |
-| |`|-|-| EE3 | | | | | |EE3{background-color:#ccffcc}=Branch 3
-</diagram>
 However, this can be flexibly adjusted according to your requirements. The only requirement is that **batchRoots** is defined as a cell array containing the paths to all of your datasets.