Differences

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--- setup:data_configuration [2019/07/12 16:07] – pseudomoaner
+++ setup:data_configuration [2020/06/03 19:41] (current) – pseudomoaner
@@ Line 23: / Line 23: @@
 For large experiments consisting of many individual image series, each separate image file should be placed in a separate directory. For example, we may have collected data under several different experimental conditions, with several replicates of each condition. In this case we might set up our directory structure as shown:
-\\
+{{ :setup:setupfiles.png?nolink&300 |}}
-<diagram>
-| RRR | | | | | | | | | | | |RRR{background-color:#ccffff}=Root
-| |!| | | | | | | | | | | | |
-| |)|-|-| EE1 | | | | | | | |EE1{background-color:#ccffcc}=Experiment 1
-| |!| | | |!| | | | | | | | |
-| |!| | | |)|-| RE1 | | | | |RE1{background-color:#ffffcc}=Replicate 1
-| |!| | | |!| | |!| | | | | |
-| |!| | | |!| | |`|-|-| IM1 |IM1{background-color:#ffcccc}=Image.tif
-| |!| | | |!| | | | | | | | |
-| |!| | | |)|-| RE2 | | | | |RE2{background-color:#ffffcc}=Replicate 2
-| |!| | | |!| | | | | | | | |
-| |!| | | |`|-| RE3 | | | | |RE3{background-color:#ffffcc}=Replicate 3
-| |!| | | | | | | | | | | | |
-| |)|-|-| EE2 | | | | | | | |EE2{background-color:#ccffcc}=Experiment 2
-| |!| | | | | | | | | | | | |
-| |`|-|-| EE3 | | | | | | | |EE3{background-color:#ccffcc}=Experiment 3
-</diagram>
-\\
 <note>
@@ Line 50: / Line 30: @@
 Once a single image series has been analysed using the FAST GUI, other datasets within the experiment can be analysed using the same parameters with FAST's [[usage:batch processing]] system.