setup:data_configuration

Differences

This shows you the differences between two versions of the page.

Link to this comparison view

Both sides previous revision Previous revision
setup:data_configuration [2020/06/03 18:35] – [Video demonstration] pseudomoanersetup:data_configuration [2020/06/03 19:41] (current) pseudomoaner
Line 23: Line 23:
 For large experiments consisting of many individual image series, each separate image file should be placed in a separate directory. For example, we may have collected data under several different experimental conditions, with several replicates of each condition. In this case we might set up our directory structure as shown: For large experiments consisting of many individual image series, each separate image file should be placed in a separate directory. For example, we may have collected data under several different experimental conditions, with several replicates of each condition. In this case we might set up our directory structure as shown:
  
-\\ +{{ :setup:setupfiles.png?nolink&300 |}}
- +
-<diagram> +
-| RRR | | | | | | | | | | | |RRR{background-color:#ccffff}=Study +
-| |!| | | | | | | | | | | | | +
-| |)|-|-| EE1 | | | | | | | |EE1{background-color:#ccffcc}=Experiment 1 +
-| |!| | | |!| | | | | | | | |  +
-| |!| | | |)|-| RE1 | | | | |RE1{background-color:#ffffcc}=Replicate (root) 1 +
-| |!| | | |!| | |!| | | | | |  +
-| |!| | | |!| | |`|-|-| IM1 |IM1{background-color:#ffcccc}=Image.tif +
-|!| | | |!| | | | | | | | |  +
-| |!| | | |)|-| RE2 | | | | |RE2{background-color:#ffffcc}=Replicate (root) 2 +
-| |!| | | |!| | | | | | | | | +
-| |!| | | |`|-| RE3 | | | | |RE3{background-color:#ffffcc}=Replicate (root) 3 +
-| |!| | | | | | | | | | | | |  +
-| |)|-|-| EE2 | | | | | | | |EE2{background-color:#ccffcc}=Experiment 2 +
-| |!| | | | | | | | | | | | |  +
-| |`|-|-| EE3 | | | | | | | |EE3{background-color:#ccffcc}=Experiment 3 +
-</diagram> +
- +
-\\+
  
 <note> <note>
  • setup/data_configuration.1591205758.txt.gz
  • Last modified: 2020/06/03 18:35
  • by pseudomoaner